PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Z6I4Q
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 293aa    MW: 32385.6 Da    PI: 8.3172
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Z6I4QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.2e-1096143455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Aradu.Z6I4Q  96 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 143
                  8**************************....999*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.28E-1590150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.20E-990145No hitNo description
PROSITE profilePS5088815.61892142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-1592150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-796143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.8E-798148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009637Biological Processresponse to blue light
GO:0009911Biological Processpositive regulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MPPAPSSSSA ISSFVSPKKR KSESHKVVVA QQSHNKKDKR VKVSAEEESS KMSEQITNKD  60
EVASAENSIK GSTSEPHNNK PDYIHVRARR GQATDSHSLA ERVRREKISE RMKYLQDLVP  120
GCNKITGKAG MLDEIINYVQ SLQRQFLSMK LAAVNPRLEL NVDDLFAKEV FPACAPNFES  180
IGMGSSEMTN NPAAYLDFNS VQQLVSCSNG LINNIGMNMT PSPDMGLRKT IAAPLSVSLP  240
ETFLDSSSCF NQVLPPSIWE GEFQIQNLYN VAFDQPRTSS FPPSHPFTGT YKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015952003.10.0PREDICTED: transcription factor bHLH63-like
TrEMBLK7LP951e-115K7LP95_SOYBN; Uncharacterized protein
STRINGGLYMA11G12450.31e-114(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36183463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.13e-56cryptochrome-interacting basic-helix-loop-helix 1